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3D structure of trimeric HIV-1 spike

3D structure of trimeric HIV-1 spike. See article by Liu et al (2008).

Press Release: Structure of trimeric HIV-1
1. NCI News

Architecture of simian immunodeficiency virus determined using cryo-electron tomography

Architecture of simian immunodeficiency virus determined using cryo-electron tomography. See article by Sougrat et al (2007).


Press Releases: HIV Molecular Entry Claw
1. NIH News
2. NIH Research Matters

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RESEARCH

Chemotaxis | HIV Imaging | Molecular Machines | Nanobiology

Signal transduction in bacterial chemotaxis

Bacteria sense many of the changes in their local chemical environment by the binding of ligands to a family of chemotaxis receptors, which in turn trigger the activation of a signaling pathway that ultimately regulates the rotation of the flagellar motor. A detailed understanding of the spatial and temporal architecture of the bacterial apparatus for chemotaxis is a problem of fundamental interest because it is expected to provide a framework to integrate the extensive genetic, physiological, biochemical and structural analyses of this process. Previous structural studies of this signaling pathway have largely focused on the high-resolution structures of individual components and have led to a wealth of information on the chemistry of ligand binding as well as many of the subsequent signaling steps.

 

Schematic illustration of our approach to using high resolution electron tomography

Schematic illustration of our approach to using high resolution electron tomography (center) to bridge the gap between 3D images of bacterial cells acquired at optical resolution (top left) with atomic structures of chemotaxis receptors obtained using X-ray crystallography (bottom right).
For more details see Lefman et al (2004).

 

 


We are taking a multi-pronged approach towards these goals. Thus, we have initiated studies to establish a systematic catalog of types of multi-protein assemblies that occur in bacterial cells engineered to express signaling components in high concentrations. We are determining the three-dimensional shapes of stable multi-protein complexes formed between different members of the signaling apparatus using cryo electron microscopy of frozen hydrated specimens of purified protein complexes. We are crystallizing receptors in the plane of the membrane in the presence and absence of signaling components to use electron crystallographic approaches to generate plausible atomic models for the membrane assemblies and multi-protein complexes by positioning known high-resolution structures of the individual components into the EM-derived density maps. In addition, we have initiated whole cell imaging studies of plunge-frozen (i.e. vitrified s spensions) wild-type E.coli and a variety of mutants, with the goal of describing the cellular architecture of the entire apparatus in terms of the various sub-assemblies.

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